../../tmp/servers/virsirnadb/915508671
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi1417 | 1 | aaccttgctgcagttagga | 19 | |
| K00108.1 | BLCNCNP La Crosse virus genome molecule S cDNA to genomic RNA | 184 | ................... | 202 | 100 |
| K00610.1 | BLCSRNA La Crosse virus S RNA, complete, coding for the N and NS-s pro | 184 | ................... | 202 | 100 |
| U12797.1 | CEU12797 California encephalitis virus - BFS-283 segment S RNA N prote | 181 | ................... | 199 | 100 |
| U12800.1 | CEU12800 California encephalitis virus E6071 S RNA segment, N and NSs | 181 | ................... | 199 | 100 |
| U31989.1 | MBU31989 Morro Bay virus S RNA segment, nucleocapsid protein (N) and n | 181 | ................... | 199 | 100 |
| DQ196120.1 | La Crosse virus strain 77 segment small, complete sequence | 184 | ................... | 202 | 100 |
| EF485030.1 | La Crosse virus strain LACV/human/1960 segment small, complete sequen | 184 | ................... | 202 | 100 |
| EF485033.1 | La Crosse virus strain LACV/human/1978 segment small, complete sequen | 184 | ................... | 202 | 100 |
| EF485036.1 | La Crosse virus strain LACV/mosquito/1978 segment small, complete seq | 184 | ................... | 202 | 100 |
| J02390.1 | SSHS Snowshoe hare bunyavirus small viral RNA | 182 | ..t................ | 200 | 94 |
| EU294510.1 | Snowshoe hare virus segment small, complete sequence | 135 | ..t................ | 153 | 94 |
| D10370.1 | BLCMRP La Crosse virus M RNA for polyprotein, complete cds | 3863 | _...c.t.........___ | 3849 | 68 |
| U70207.1 | LCU70207 La Crosse virus polyprotein gene, complete cds | 3863 | _...c.t.........___ | 3849 | 68 |
| U70207.1 | LCU70207 La Crosse virus polyprotein gene, complete cds | 2237 | .........ag..______ | 2249 | 57 |
| U70208.1 | LCU70208 La Crosse virus polyprotein gene, complete cds | 3863 | _...c.t.........___ | 3849 | 68 |
| U70208.1 | LCU70208 La Crosse virus polyprotein gene, complete cds | 2237 | .........ag..______ | 2249 | 57 |
| EF485037.1 | La Crosse virus strain LACV/mosquito/1978 segment medium, complete se | 3863 | _...c.t.........___ | 3849 | 68 |
| EF485037.1 | La Crosse virus strain LACV/mosquito/1978 segment medium, complete se | 2237 | .........ag..______ | 2249 | 57 |
| U47139.1 | SAU47139 San Angelo virus Prototype VR723 nucleocapsid protein and non | 186 | _______..t......... | 197 | 57 |
| K02539.1 | SSHM Snowshoe hare virus, complete M RNA segment coding for G protein | 1735 | _____.t..........__ | 1724 | 57 |
| EU262553.1 | Snowshoe hare virus segment M G1/G2 membrane polyprotein gene, comple | 1716 | _____.t..........__ | 1705 | 57 |
| U88057.1 | MVU88057 Melao virus M segment polyprotein gene, complete cds | 2524 | ____..aa.........a. | 2510 | 63 |
| M87664.1 | BLCG2NSM Bunyavirus La Crosse G2/Nsm/G1 gene, open reading frame | 2214 | .........ag..______ | 2226 | 57 |
| U18979.1 | LCU18979 La Crosse virus isolate LAC30928-31 M segment polyprotein gen | 2237 | .........ag..______ | 2249 | 57 |
| U18980.1 | LCU18980 La Crosse virus isolate LAC22988-89 M segment polyprotein gen | 2237 | .........ag..______ | 2249 | 57 |
| U70205.1 | LCU70205 La Crosse virus polyprotein gene, complete cds | 2237 | .........ag..______ | 2249 | 57 |
| U70206.1 | LCU70206 La Crosse virus polyprotein gene, complete cds | 2237 | .........ag..______ | 2249 | 57 |
| DQ196119.1 | La Crosse virus strain 77 segment middle, complete sequence | 2237 | .........ag..______ | 2249 | 57 |
| EF485031.1 | La Crosse virus strain LACV/human/1960 segment medium, complete seque | 2237 | .........ag..______ | 2249 | 57 |
| EF485034.1 | La Crosse virus strain LACV/human/1978 segment medium, complete seque | 2237 | .........ag..______ | 2249 | 57 |
| EU621834.1 | Chatanga virus strain LEIV-17756 segment M polyprotein gene, complete | 72 | ________.........c. | 82 | 52 |
| EU621834.1 | Chatanga virus strain LEIV-17756 segment M polyprotein gene, complete | 1722 | _____.t.........___ | 1712 | 52 |